I see no persecution of Atheism. I do see Atheists getting their knickers in a twist because someone may be expressing a belief that they don't agree with. Reference ACLU. They give one the idea that they might just be a bit narrow minded and bigoted. Their way or the highway. They just provide fuel for the religious hand wringers. They aren't bothering folks like myself one bit. They want to protest? That's their right. They want to get in my realm and spout shit, they can expect it back.
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